A series of ImageJ plugins to run z stack imaging processing faster. Theses are two FIJI (ImageJ) plugins I used to automate part of the image processing I needed with some confocal microscopy images.

A preliminary creation of Maximum Intensity Projection (MIPs) for each image. A testing step which allows to test the workflow on small portions of images in order to select the best parameters for ...

Due to advances to microscopic imaging, there are a plethora of biological molecules that can now be tagged and subsequentially imaged from almost any cell, organism, or tissue. However, the ability ...

This plugin adds text annotations to the specified range of images in a stack. Permission to use, copy, modify, and distribute this software for any purpose without fee is hereby granted, provided ...

For the past 25 years NIH Image and ImageJ software have been pioneers as open tools for the analysis of scientific images. We discuss the origins, challenges and solutions of these two programs, and ...