Although the main pindakaas library is written in rust, it is also available from Python. (A C(++) interface is also under consideration). This library is also heavily inspired by PBLib, an earlier ...

This project is a Python-based Boolean Network Simulator that models the evolution of Boolean networks over time. Boolean networks are mathematical models used to describe the dynamics of complex ...

AEON.py is a Python library for the analysis of the long-term behaviour in very large asynchronous Boolean networks. It provides significant computational improvements over the state-of-the-art ...

pystablemotifs is a Python 3 library for analyzing Boolean networks. Its non-heuristic and exhaustive attractor identification algorithm was previously presented in (Rozum et al. 2021). Here, we ...

Abstract: Sparse matrices are widely applicable in data analysis while the theory of matrix processing is well-established. There are a wide range of algorithms for basic operations such as ...

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